The detailed information of tRNA gene sequence


Sequence ID>SRA1002390
Genome IDSRR001323.38214
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 103
End posion on genome 27
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGTTAGAGCACTGCGTTGACATCGCAGAGGTCAGTGGTTCAAG
TCCACTATCGCCCACTA
Downstream region at tRNA end position 
ttttatctgg
Secondary structure (Cloverleaf model)
>SRA1002390	Val	GAC
                   c      ACTA ttttatctgg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G + T
                     T - A          T G
                    T     T C A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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