The detailed information of tRNA gene sequence


Sequence ID>SRA1002393
Genome IDSRR001323.43058
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 113
End posion on genome 37
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cccgtcaaaa
tRNA gene sequence 
GGGGCCGTGGTCCAGTTTGGTCTAAGATTCGCGCCTGGGGCGCGCGCGGTCCGGGGTTCA
AATCCCCGCGGCCCCACat
Downstream region at tRNA end position 
tagctttgaa
Secondary structure (Cloverleaf model)
>SRA1002393	Pro	GGG
                   a      ACat tagctttgaa
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
    T T G A        G      | | | | |     A
  T         C C T G       C G G G G     C
  G           | | +                 T T
  G         A G A T
    T C T A        T     CGGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       C
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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