The detailed information of tRNA gene sequence


Sequence ID>SRA1002396
Genome IDSRR001323.47395
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 108
End posion on genome 35
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
TGGGGGATAGTCTAGTGGTAGGACACATGGCTCTGGACCATGCAGGGGAGGTTCGAATCC
TCCTCCCCCAGCCA
Downstream region at tRNA end position 
ataaataggg
Secondary structure (Cloverleaf model)
>SRA1002396	Gln	CTG
                   c      GCCA ataaataggg
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C T C C     A
        G A        A      | | | | |     G
      T     T C T G       G G A G G     C
      G     + | | |                 T T
      G     G G A C
        T A        A     CAGG
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  C       A
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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