The detailed information of tRNA gene sequence


Sequence ID>SRA1002398
Genome IDSRR001323.53117
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 91
End posion on genome 5
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctgtgatact
tRNA gene sequence 
GGAGGGGTGACCGAGTGGCTTATGGTGACGGTCTTGAAAACCGTTTTCGCTTCTAGCGAA
CGTGGGTTCGAATCCCACCTCCTCCGCtt
Downstream region at tRNA end position 
atnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002398	Ser	TGA
                   t      GCtt atnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G T G G G     C
    G       + | | |                 T T
    C       T G G T
      T T A        G     TTTCGCTTCTAGCGAAC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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