The detailed information of tRNA gene sequence


Sequence ID>SRA1002399
Genome IDSRR001323.53235
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 34
End posion on genome 106
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tctatgcggt
tRNA gene sequence 
GCCGGGGTGGCCGAACGGTTCAGGCGGCAGCCTGCAGAGCTGCTATATATGGGTTCAATT
CCCATCCCCGGCTttt
Downstream region at tRNA end position 
aggnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002399	Cys	GCA
                   t      Tttt aggnnnnnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T T
                    T     T A C C C     A
      C A A        G      | | | | |     A
    G       G C C G       A T G G G     C
    G         | | |                 T T
    T       A G G C
      T C          G     TATAT
                    G - C
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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