The detailed information of tRNA gene sequence


Sequence ID>SRA1002404
Genome IDSRR001323.59359
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 19
End posion on genome 93
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tctgatagaT
tRNA gene sequence 
GGGGCTGTAGCTCAGCTGGGAGAGCGCCTCCTTTGCACGGAGGAGGTCAGGGGTTCGAGT
CCCCTCAGCTCCAGnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002404	Ala	TGC
                   T      AGnn nnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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