The detailed information of tRNA gene sequence


Sequence ID>SRA1002405
Genome IDSRR001323.60757
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 5
End posion on genome 82
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
nnnnnntagc
tRNA gene sequence 
GGGCCGGTAGTCCAGCGTGGTTAAGACGTCGCCCTCACGCGGCGAAGATCGCCGGTTCAA
ATCCGGCCCGGCCCACCA
Downstream region at tRNA end position 
ccataaataa
Secondary structure (Cloverleaf model)
>SRA1002405	Val	CAC
                   c      ACCA ccataaataa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G G C C     A
    G C G A        A      | | | | |     A
  T         C C T G       G C C G G     C
  G           | | |                 T T
  G         A G A C
    T T A          G     AGATC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       G
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK