The detailed information of tRNA gene sequence


Sequence ID>SRA1002408
Genome IDSRR001323.63581
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 16
End posion on genome 89
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
catgtatgtt
tRNA gene sequence 
TGCCGGGTGGCTGAGCGGTTAGGCGGCCGGCTGCAGACCGGCTGAACACCGGTTCAAATC
CGGTCCCGGCTCCAa
Downstream region at tRNA end position 
cctctaaaag
Secondary structure (Cloverleaf model)
>SRA1002408	Cys	GCA
                   t      CCAa cctctaaaag
                     T   T
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     T G G C C     A
        G A        G      | | | | |     A
      C     G T C G       A C C G G     C
      G       + | |                 T T
      G     A G G C
        T T        G     TGAAC
                    G - C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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