The detailed information of tRNA gene sequence


Sequence ID>SRA1002409
Genome IDSRR001323.64991
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 2
End posion on genome 76
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
TCCCCGGTAGCTCAACGGTAGAGCAGGCGGCTGTTAACCGTAAGGTTGTAGGTTCGAATC
CTACCCGGGGAGCCA
Downstream region at tRNA end position 
agtctaaata
Secondary structure (Cloverleaf model)
>SRA1002409	Asn	GTT
                   t      GCCA agtctaaata
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C A T C C     A
        A A        A      | | | | |     G
      C     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTT
                    G   A
                    G + T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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