The detailed information of tRNA gene sequence


Sequence ID>SRA1002413
Genome IDSRR001323.81661
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 85
End posion on genome 8
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tttgtggctg
tRNA gene sequence 
GCCCCTGTAGCTCAGTTTGGAGAGAGCAACTGCCTTCTAAGCAGTGGGTCGGGGGTTCAA
ATCCCTCCAGGGGTACCA
Downstream region at tRNA end position 
aggcaaannn
Secondary structure (Cloverleaf model)
>SRA1002413	Arg	TCT
                   g      ACCA aggcaaannn
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C T C C C     A
    T T G A        A      | + | | |     A
  T         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    A G A          A     GGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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