The detailed information of tRNA gene sequence


Sequence ID>SRA1002424
Genome IDSRR001323.105489
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 31
End posion on genome 120
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atgtaatcgT
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTTATGGTGCCGCTCTCGAAAAGCGGTCTCCGGTTAAACCGG
AGCGTGGGTTCGAATCCCACCCTCTCCGCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002424	Ser	CGA
                   T      GCnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G       + | |                   T T
    T       T G G T
      T T A        G     TCTCCGGTTAAACCGGAGC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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