The detailed information of tRNA gene sequence


Sequence ID>SRA1002426
Genome IDSRR001323.110328
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 1
End posion on genome 79
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
CGGGATGTAGCGCAGCCTGGTTTAGCGCGCCTGCTTCGGGAGTAGGAGGTCGTGGGTTCG
AATCCCACCATCCCGACCA
Downstream region at tRNA end position 
taaatcgtac
Secondary structure (Cloverleaf model)
>SRA1002426	Pro	CGG
                   n      ACCA taaatcgtac
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C A C C C     A
    C C G A        A      | | | | |     G
  T         C G C G       G T G G G     C
  G         | | | |                 T T
  G         G C G C
    T T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G + T
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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