The detailed information of tRNA gene sequence


Sequence ID>SRA1002428
Genome IDSRR001323.117340
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 11
End posion on genome 95
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
aagtagctcc
tRNA gene sequence 
GGAGGGGTGCCGGAGTGGTTAATCGGAGCAGACTGTAAATCTGCCGCCCTAAGGGCTACG
CAGGTTCGAATCCTGCCCCTCACCAtt
Downstream region at tRNA end position 
aattcagata
Secondary structure (Cloverleaf model)
>SRA1002428	Tyr	GTA
                   c      CAtt aattcagata
                     G - C
                     G   A
                     A   C
                     G + T
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    G       G G C C       G C A G G     C
    G       + | | |                 T T
    T       T C G G
      T A A        A     CGCCCTAAGGGCTAC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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