The detailed information of tRNA gene sequence


Sequence ID>SRA1002431
Genome IDSRR001323.125417
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 16
End posion on genome 91
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
taagcagacc
tRNA gene sequence 
TGCCCGGTGGCTCAGACCGGTAGAGCGGCAGCCTCGTAAGCTGTTGGTCGCGGGTTCAAA
TCCCGCCCGGGCTCCAa
Downstream region at tRNA end position 
agcttcccta
Secondary structure (Cloverleaf model)
>SRA1002431	Thr	CGT
                   c      CCAa agcttcccta
                     T   T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
      A G A        G      | | | | |     A
    C       C T C G       G C G G G     C
    C       | | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    G + T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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