The detailed information of tRNA gene sequence


Sequence ID>SRA1002432
Genome IDSRR001323.131901
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 102
End posion on genome 14
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gccctactat
tRNA gene sequence 
GGAGGGGTGTCCGAGAGGCCTAAGGAGGCGGTCTTGAAAACCGCTGTCTCCGTAAGGGAC
CGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
ctagaggggt
Secondary structure (Cloverleaf model)
>SRA1002432	Ser	TGA
                   t      GCCA ctagaggggt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      A G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    C       A G G A
      C T A        G     TGTCTCCGTAAGGGACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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