The detailed information of tRNA gene sequence


Sequence ID>SRA1002436
Genome IDSRR001323.142166
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 39
End posion on genome 112
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ctaaaaagtg
tRNA gene sequence 
GCCGAGGTGAGGTAGCATGGTAGCCTACGGGCCTGTGGAGCCCGGCGCCCGGGTTCAAAT
CCCGGCCTCGGCCCtc
Downstream region at tRNA end position 
aaaaaattgt
Secondary structure (Cloverleaf model)
>SRA1002436	His	GTG
                   g      CCtc aaaaaattgt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        G      | | | | |     A
    A       T G G A       C C G G G     C
    T       + | | |                 T T
    G       G C C T
      G T A        A     GCGC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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