The detailed information of tRNA gene sequence


Sequence ID>SRA1002438
Genome IDSRR001323.143851
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 93
End posion on genome 16
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gcctttaaac
tRNA gene sequence 
GGGGCCGTCGGCTAGCATGGTCTAGGCTCTGAGACTTGGGCTCTCGGGACCCCGGTTCGA
ATCCGGGCGGCCCCACCA
Downstream region at tRNA end position 
caccttgttt
Secondary structure (Cloverleaf model)
>SRA1002438	Pro	TGG
                   c      ACCA caccttgttt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G G C C     A
    A C G A        C      | | | | |     G
  T         T C G G       C C C G G     C
  G         + | | +                 T T
  G         G G C T
    T C T A        C     GGAC
                    T + G
                    G - C
                    A - T
                    G - C
                    A - T
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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