The detailed information of tRNA gene sequence


Sequence ID>SRA1002442
Genome IDSRR001323.153954
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 30
End posion on genome 105
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atgtatgttt
tRNA gene sequence 
GCCGGGGTGGTCTGAGCGGTTAGGCGGCCGGCTGCAGACCGGCTGAACACCGGTTCAAAT
CCGGTCCCCGGCTCCA
Downstream region at tRNA end position 
aacctctaaa
Secondary structure (Cloverleaf model)
>SRA1002442	Cys	GCA
                   t      TCCA aacctctaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G G C C     A
      G A G        G      | | | | |     A
    C       T C T G       A C C G G     C
    G       | | + |                 T T
    G       A G G C
      T T          G     TGAAC
                    G - C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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