The detailed information of tRNA gene sequence


Sequence ID>SRA1002444
Genome IDSRR001324.1662
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 1
End posion on genome 84
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GCGGACGTGGCGGAATAGGAAGACGCTCAAGGCTTAGGACCTTGTGGCAGCGATGCCGTG
GGGGTTCAACTCCCTCCGTCCGCAttg
Downstream region at tRNA end position 
attaggttat
Secondary structure (Cloverleaf model)
>SRA1002444	Leu	TAG
                   n      Attg attaggttat
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T C
                    T     C T C C C     A
      T A A        G      | + | | |     A
    A       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      A A G        T     TGGCAGCGATGCCGT
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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