The detailed information of tRNA gene sequence


Sequence ID>SRA1002447
Genome IDSRR001324.6417
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 1
End posion on genome 73
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GCCAGCGTAGCTCAGTTGGTAGAGCAGCTGATTTGTAATCAGCGGGTCAGGGGTTCGAAT
CCTCTCGCTGGCTttg
Downstream region at tRNA end position 
gatgaagaga
Secondary structure (Cloverleaf model)
>SRA1002447	Thr	TGT
                   n      Tttg gatgaagaga
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      T G A        A      | | + | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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