The detailed information of tRNA gene sequence


Sequence ID>SRA1002448
Genome IDSRR001324.8522
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 89
End posion on genome 15
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gcgtgcagca
tRNA gene sequence 
GGCGACGTAGCCAAGTGGTAAGGCAGGGGTCTGCAAAACCCTTATTCGCCGGTTCGATTC
CGGCCGTCGCCTCCT
Downstream region at tRNA end position 
tcgccgctat
Secondary structure (Cloverleaf model)
>SRA1002448	Cys	GCA
                   a      TCCT tcgccgctat
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T T
                    T     C G G C C     A
        G A        A      | | | | |     G
      T     A C C G       G C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATTC
                    G + T
                    G - C
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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