The detailed information of tRNA gene sequence


Sequence ID>SRA1002450
Genome IDSRR001324.12900
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 32
End posion on genome 107
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
agggagtatt
tRNA gene sequence 
GGGGCCGTAGGGTAGCTTGGCCCATCCTCCAGGCTTTGGGAGCCTGATACCCGAGTTCAA
ATCTCGGCGGCCCCACtt
Downstream region at tRNA end position 
ttaagtggta
Secondary structure (Cloverleaf model)
>SRA1002450	Pro	TGG
                   t      ACtt ttaagtggta
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C T C     A
    T C G A        A      | | | | |     A
  T         T G G G       C C G A G     C
  G           | | +                 T T
  G         T C C T
    C C C A        C     ATAC
                    C - G
                    A - T
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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