The detailed information of tRNA gene sequence


Sequence ID>SRA1002451
Genome IDSRR001324.13158
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 7
End posion on genome 84
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnctattc
tRNA gene sequence 
AGGGGTGTAGCTCAGTTTGGCTAGAGCAGCGGTCTCCAAAACCGCAGGTCGCGGGTTCGA
GTCCTGCCACCCCTGCCA
Downstream region at tRNA end position 
ggccgaggtg
Secondary structure (Cloverleaf model)
>SRA1002451	Trp	CCA
                   c      GCCA ggccgaggtg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C G T C C     A
    T T G A        A      | | + | |     G
  T         C T C G       G C G G G     C
  G         | | | |                 T T
  G         G A G C
    C T A          A     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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