The detailed information of tRNA gene sequence


Sequence ID>SRA1002455
Genome IDSRR001324.23157
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 24
End posion on genome 96
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcccgctgt
tRNA gene sequence 
GGGCTCGTAGCTCAGTGGCAGAGCGGGCGGCTCATAACCGTCTGGGCGTAGGTTCGAATC
CTGCCGAGCCCACtt
Downstream region at tRNA end position 
ccttttgtan
Secondary structure (Cloverleaf model)
>SRA1002455	Met	CAT
                   t      ACtt ccttttgtan
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G T C C     A
        G A        A      | + | | |     G
      T     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        G     TGGGC
                    G - C
                    G + T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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