The detailed information of tRNA gene sequence


Sequence ID>SRA1002459
Genome IDSRR001324.26909
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 40
End posion on genome 110
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
taaggagaac
tRNA gene sequence 
GGGCGGGTAACAAAGTGGCTATGTGGCGGACTGCAGATCCGCATACGGGGGTTCAAATCC
CCCCCCGCCCTnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002459	Cys	GCA
                   c      Tnnn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     C C C C C     A
        G A        A      | | | | |     A
      T     A A C A       G G G G G     C
      G       | | |                 T T
      G     A T G T
        C T        G     ATAC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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