The detailed information of tRNA gene sequence


Sequence ID>SRA1002461
Genome IDSRR001324.34939
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 115
End posion on genome 39
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GGCGGTGTAGCTCAGGTGGTTAGAGCATACGGCTCATATCCGTAGTGTCGGGGGTTCAAG
TCCCTCCACCGCCACCA
Downstream region at tRNA end position 
ttttatacag
Secondary structure (Cloverleaf model)
>SRA1002461	Met	CAT
                   c      ACCA ttttatacag
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      G G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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