The detailed information of tRNA gene sequence


Sequence ID>SRA1002476
Genome IDSRR001324.61091
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 90
End posion on genome -1
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgtcctacgc
tRNA gene sequence 
GGAGAGGTGGCCGAGATGGCTTAAGGCGGTCGCCTGCTAAGCGACTATGGGGTTTATAGC
TCCATCGCGGGTTCGAATCCCGCCCTCTCCNNnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002476	Ser	GCT
                   c      NNnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    T A G A        G      | | | | |     G
  G         G C C G       G C G G G     C
  G           | | |                 T T
  C         A G G C
    T T A          G     TATGGGGTTTATAGCTCCATC
                    G - C
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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