The detailed information of tRNA gene sequence


Sequence ID>SRA1002477
Genome IDSRR001324.63276
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 92
End posion on genome 18
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tagntaatnt
tRNA gene sequence 
GGGGCTGTAGCGCATCGGGAGCGCGCCTCCTTGGCGTGGAGGAGGTCGCGGGTTCGATTC
CCGCCAGCTCCACCA
Downstream region at tRNA end position 
aattataata
Secondary structure (Cloverleaf model)
>SRA1002477	Ala	GGC
                   t      ACCA aattataata
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T T
                    T     C G C C C     A
        T A        A      | | | | |     G
      C     C G C G       G C G G G     C
      G     | | | |                 T T
      G     G C G C
        G A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       T
                  T       G
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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