The detailed information of tRNA gene sequence


Sequence ID>SRA1002478
Genome IDSRR001324.64585
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 96
End posion on genome 22
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nncgtagaaa
tRNA gene sequence 
GGCGACATAGCCAAGCGGTAAGGCGTTGGCCTGCAAAGCCGATCATCCTCGGTTCGACTC
CGAGTGTCGCCTCCA
Downstream region at tRNA end position 
aacagagcac
Secondary structure (Cloverleaf model)
>SRA1002478	Cys	GCA
                   a      TCCA aacagagcac
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T C
                    T     G A G C C     A
        G A        A      | | | | |     G
      C     A C C G       C T C G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TCATC
                    T - A
                    T + G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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