The detailed information of tRNA gene sequence


Sequence ID>SRA1002487
Genome IDSRR001324.89229
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 29
End posion on genome 116
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
aaacccgaga
tRNA gene sequence 
GGGGTAGCGTCGGAGATGGGGAGCCGAGCCAGTCTGTAAAACTGGTGCCCTTAGGGCTGA
GTAGGTTCAAATCCTACCTACCCCACCA
Downstream region at tRNA end position 
atcagnnnnn
Secondary structure (Cloverleaf model)
>SRA1002487	Tyr	GTA
                   a      ACCA atcagnnnnn
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C          T A
                    C     C A T C C     A
    T A G A        G      | | | | |     A
  G         G G C T       G T A G G     C
  G         | | | |                 T T
  G         C C G A
    G A G          G     TGCCCTTAGGGCTGA
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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