The detailed information of tRNA gene sequence


Sequence ID>SRA1002500
Genome IDSRR001325.17183
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 31
End posion on genome 106
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tagcaaaggT
tRNA gene sequence 
GGGCCGCTAGCTCAGTCTGGAAGAGCAACAGGCTCTTAACCTGTGGGTCGGGGGTTCAAA
TCCCTCGCGGCCCGTat
Downstream region at tRNA end position 
ttnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002500	Lys	CTT
                   T      GTat ttnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    C       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G A A        A     GGGTC
                    A - T
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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