The detailed information of tRNA gene sequence


Sequence ID>SRA1002504
Genome IDSRR001325.20424
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 6
End posion on genome 81
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
nnnnattagT
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGTTAGAGTACTGCGTTGACATCGCAGAGGTCAGTGGTTCAAG
TCCACTACCGCCCATac
Downstream region at tRNA end position 
cagcattagt
Secondary structure (Cloverleaf model)
>SRA1002504	Val	GAC
                   T      ATac cagcattagt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T G
                    T     T C A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G T G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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