The detailed information of tRNA gene sequence


Sequence ID>SRA1002505
Genome IDSRR001325.32463
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 20
End posion on genome 105
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtgtgaccaa
tRNA gene sequence 
GGAGAGGTGACCGAGTGGTTGATGGTGCCGCTCTCGAAAAGCGGTGGGCAGCAATGCCTC
GTGGGTTCGAATCCCACCCTCTCCGCgg
Downstream region at tRNA end position 
agnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002505	Ser	CGA
                   a      GCgg agnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G T G G G     C
    G       + | | |                 T T
    T       T G G T
      T G A        G     TGGGCAGCAATGCCTC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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