The detailed information of tRNA gene sequence


Sequence ID>SRA1002509
Genome IDSRR001325.57985
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 85
End posion on genome 11
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
atacaggcgt
tRNA gene sequence 
GCCCCTGTAGCTCAGAGGATAGAGCGCTGGCCTCCGGAGCCAGGTGCGTGGGTTCGAGTC
CCGCCAGGGGTACCA
Downstream region at tRNA end position 
tctggttggg
Secondary structure (Cloverleaf model)
>SRA1002509	Arg	CCG
                   t      ACCA tctggttggg
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C G C C C     A
      A G A        A      | + | | |     G
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    A       G A G C
      T A          G     GTGC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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