The detailed information of tRNA gene sequence


Sequence ID>SRA1002510
Genome IDSRR001325.65467
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 29
End posion on genome 106
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ctagtaatat
tRNA gene sequence 
GGGGTCGTTGTCTAGTTTGGTTAGGATCCCAGCCTGGGGTGCTGGAGGTCCGGGGTTCAA
ATCCCCGCGACCCCACCA
Downstream region at tRNA end position 
aaagcttctt
Secondary structure (Cloverleaf model)
>SRA1002510	Pro	GGG
                   t      ACCA aaagcttctt
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     G C C C C     A
    T T G A        T      | | | | |     A
  T         T C T G       C G G G G     C
  G         + | | +                 T T
  G         G G A T
    T T A          C     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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