The detailed information of tRNA gene sequence


Sequence ID>SRA1002517
Genome IDSRR001325.75754
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 97
End posion on genome 21
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttaggttact
tRNA gene sequence 
ACGGGTGTAGCTCAGTTGGTAGAGCACTGGTCTCCAAAACCAAGGTGTCGGGAGTTCGAG
TCTCTCCTCCCGTGCGA
Downstream region at tRNA end position 
agagaacaga
Secondary structure (Cloverleaf model)
>SRA1002517	Trp	CCA
                   t      GCGA agagaacaga
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T   T
                     G - C          T G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGTGTC
                    C   A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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