The detailed information of tRNA gene sequence


Sequence ID>SRA1002521
Genome IDSRR001325.86047
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 30
End posion on genome 106
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gagcgaaaga
tRNA gene sequence 
AGGGGTGTAGCTCAGTTGGCTAGAGCAGCGGTCTCCAAAACCGCAGGTCGGGGGTTCGAG
TCCTCCCGCCCCTGCCA
Downstream region at tRNA end position 
gannnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002521	Trp	CCA
                   a      GCCA gannnnnnnn
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     C C T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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