The detailed information of tRNA gene sequence


Sequence ID>SRA1002523
Genome IDSRR001325.90629
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 106
End posion on genome 21
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
nnnntaaaga
tRNA gene sequence 
GCCGAAGTGGCGGAAAGGCAGACGCGCTACGTTCAGGGCGTAGTGCCCGTATGGGCGTGA
GGGTTCAAATCCCTCCTTCGGCACCA
Downstream region at tRNA end position 
tttgcaccgg
Secondary structure (Cloverleaf model)
>SRA1002523	Leu	CAG
                   a      ACCA tttgcaccgg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A A        G      | | | | |     A
    G       G G C G       G A G G G     C
    G         | | |                 T T
    C       A C G C
      A G          G     TGCCCGTATGGGCGT
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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