The detailed information of tRNA gene sequence


Sequence ID>SRA1002524
Genome IDSRR001325.91148
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 42
End posion on genome 113
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aacatattgc
tRNA gene sequence 
CGCGGGGTAGAGCAGTGGAAGCTCGTCGGGCTCATAACCCGGAGGTCGCTGGTTCGAATC
CAGCCCCCGCTAann
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002524	Met	CAT
                   c      Aann nnnnnnnnnn
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
        G A        A      | | | | |     G
      T     C G A G       G C T G G     C
      G     | | | |                 T T
      G     G C T C
        A A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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