The detailed information of tRNA gene sequence


Sequence ID>SRA1002526
Genome IDSRR001325.97923
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 51
End posion on genome 124
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttagagtatt
tRNA gene sequence 
CGGGGCGTGGCGCAGTCTGGTAGCGCACCTGCTTTGGGAGCAGGGAGTCGAAGGTTCAAA
TCCTTTCGCCCCGGnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002526	Pro	TGG
                   t      Gnnn nnnnnnnnnn
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T T T C C     A
      T G A        G      + | | | |     A
    C       C G C G       G A A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GAGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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