The detailed information of tRNA gene sequence


Sequence ID>SRA1002533
Genome IDSRR001325.110516
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 111
End posion on genome 37
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
nnnnnnttgt
tRNA gene sequence 
GGGCCGTTAGCTCAGACCGGTAGAGCAGCGGACTTTTAATCCGTTGGTCGCGCGTTCGAT
TCGCGCACGGCCCACtt
Downstream region at tRNA end position 
cccacttttt
Secondary structure (Cloverleaf model)
>SRA1002533	Lys	TTT
                   t      ACtt cccacttttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     C G C G C     A
      A G A        A      | | | | |     G
    C       C T C G       G C G C G     C
    C       | | | |                 T T
    G       G A G C
      G T A        A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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