The detailed information of tRNA gene sequence


Sequence ID>SRA1002534
Genome IDSRR001325.117198
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 89
End posion on genome 17
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcactccaa
tRNA gene sequence 
GGGCTCGTAGCTCAGCGGCAGAGCAGGCGGCTCATAACCGTCCGGTCGCAGGTTCGAATC
CTGCCGAGCCCACtt
Downstream region at tRNA end position 
tcgcactagg
Secondary structure (Cloverleaf model)
>SRA1002534	Met	CAT
                   a      ACtt tcgcactagg
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G T C C     A
        G A        A      | | | | |     G
      C     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     CGGTC
                    G - C
                    G + T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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