The detailed information of tRNA gene sequence


Sequence ID>SRA1002540
Genome IDSRR001326.20943
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 13
End posion on genome 86
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
gagaattgtg
tRNA gene sequence 
GCCGGGGTGAGGTAGCCTGGTAGCCTACAGGCCTGTGGAGCCTGGCGCCCGGGTTCAAAT
CCCGGCCCCGGCCCtc
Downstream region at tRNA end position 
accgtcctct
Secondary structure (Cloverleaf model)
>SRA1002540	His	GTG
                   g      CCtc accgtcctct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        G      | | | | |     A
    C       T G G A       C C G G G     C
    T       + | | |                 T T
    G       G C C T
      G T A        A     GCGC
                    C - G
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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