The detailed information of tRNA gene sequence


Sequence ID>SRA1002543
Genome IDSRR001326.31376
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 3
End posion on genome 77
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
nnnnnnnnat
tRNA gene sequence 
GGCCCCGTGGTGTAGTGGACAAACATGCCACCCTGTCACGGTGGAGATCGGGGGTTCGAA
TCCCCCCGGGGTCGCtt
Downstream region at tRNA end position 
gttagacttt
Secondary structure (Cloverleaf model)
>SRA1002543	Asp	GTC
                   t      GCtt gttagacttt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       T G T G       G G G G G     C
    G       | | | +                 T T
    A       A C A T
      C A A        G     AGATC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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