The detailed information of tRNA gene sequence


Sequence ID>SRA1002546
Genome IDSRR001326.45406
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 116
End posion on genome 40
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
nnnnnnnntg
tRNA gene sequence 
GCCTCCGTTGCCTAGTTGGTTAGGGCGTCAGCCTTGTAAGCTGAAGACCCCGGGTTCGAA
TCCCGGCGGAGGCTCCA
Downstream region at tRNA end position 
cctctggttt
Secondary structure (Cloverleaf model)
>SRA1002546	Thr	TGT
                   g      TCCA cctctggttt
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      T G A        T      | | | | |     G
    T       T C C G       C C G G G     C
    G       + | | |                 T T
    G       G G G C
      T T A        G     AGACC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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