The detailed information of tRNA gene sequence


Sequence ID>SRA1002548
Genome IDSRR001326.49788
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 106
End posion on genome 18
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tttattcagt
tRNA gene sequence 
CCCGCGGTAACTCAGTTTGGTAGAGTGGTCGGCTGTAGACCCAAGCCGAAACCGACATGC
CGCCGGTTCAAATCCGGCCCGCGGGACCA
Downstream region at tRNA end position 
cttgaacaag
Secondary structure (Cloverleaf model)
>SRA1002548	Tyr	GTA
                   t      ACCA cttgaacaag
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C G G C C     A
      T G A        A      | | | | |     A
    T       C T C A       G C C G G     C
    T       | | | |                 T T
    G       G A G T
      G T A        G     GCCGAAACCGACATGCC
                    G   A
                    T - A
                    C   C
                    G - C
                    G - C
                  C       A
                  T       G
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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