The detailed information of tRNA gene sequence


Sequence ID>SRA1002554
Genome IDSRR001663.1799
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 22
End posion on genome 111
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agttacgact
tRNA gene sequence 
GGAGGAGTGGCAGAGTGGTCGAATGCACTGGTCTTGAAAACCAGCGAACGTTAACGCGTT
CCGTGGGTTCGAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
tttaannnnn
Secondary structure (Cloverleaf model)
>SRA1002554	Ser	TGA
                   t      GCCA tttaannnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        A     CGAACGTTAACGCGTTCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK