The detailed information of tRNA gene sequence


Sequence ID>SRA1002556
Genome IDSRR001663.3307
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 93
End posion on genome 18
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ntcacttatc
tRNA gene sequence 
GCTGGCGTGGCTCAATTGGTAGAGCACCCGATTTGTAATCGGGCGGTTGGGAGTTCGAGT
CTCTCCGCCAGCACCA
Downstream region at tRNA end position 
atttccccag
Secondary structure (Cloverleaf model)
>SRA1002556	Thr	TGT
                   c      ACCA atttccccag
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C T C T C     A
      T A A        G      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTT
                    C - G
                    C - G
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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