The detailed information of tRNA gene sequence


Sequence ID>SRA1002564
Genome IDSRR001663.19111
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 81
End posion on genome 6
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
taaaaaatta
tRNA gene sequence 
GTCCCGTTCGTCTAGAGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGACT
CCCCTACGGGACGCCA
Downstream region at tRNA end position 
tttttnnnnn
Secondary structure (Cloverleaf model)
>SRA1002564	Glu	TTC
                   a      GCCA tttttnnnnn
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T C
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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