The detailed information of tRNA gene sequence


Sequence ID>SRA1002570
Genome IDSRR001663.40793
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 82
End posion on genome 8
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cgttgttgaT
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGTAGAGCACCTGCATGGCATGCAGGGGGTCAGCGGTTCGAAT
CCGCTTGGCTCCATtg
Downstream region at tRNA end position 
attgannnnn
Secondary structure (Cloverleaf model)
>SRA1002570	Ala	GGC
                   T      ATtg attgannnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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